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phylosamp
1.0.1
Reference
Vignettes
Transmission Linkage
Estimating the linkage false discovery rate
Sample size calculations for transmission linkage
Estimating sensitivity and specificity of a linkage criteria
Illustrative Examples
Variant Tracking
Estimating bias in observed variant prevalence
Sample size calculations for variant tracking (cross-sectional sampling)
Probability of detection and prevalence estimation (cross-sectional sampling)
Sample size calculations for variant tracking (periodic sampling)
Probability of detection (periodic sampling)
Variant Surveillance Example
Changelog
Changelog
Source:
NEWS.md
phylosamp 1.0.1
Added a
NEWS.md
file to track changes to the package.
Added
relR_*
functions to the package to allow for sample size and power calculations when estimating differential transmission between groups
Contents